EoE Project - Syed Lab
414 annotated biopsy patches from 30 adult EoE patients at the University of Virginia (UVA) were used to develop a center-specific UVA eosinophil segmentation model using deep learning. 692 annotated biopsy patches from 6 pediatric EoE patients from Cincinnati Children’s Hospital (CCH) were used to develop another center-specific model. The models were evaluated in an independent test set of 100 patches from the same center and validated on 100 patches from the other center. A combined model was trained and tested on patches from both centers.
The annotated patches are present in a zip file called "UVA EoE images with masks" available for download. URL for download: https://doi.org/10.18130/V3/GB5YVH
| Keywords | eosinophilic esophagititis, deep learning, computer vision, segmentation, eoe |
| Storage Organization | University of Virginia |

Eosinophilic Esophagitis E-11_4

Eosinophilic Esophagitis E-120_2

Eosinophilic Esophagitis E-04_1

Eosinophilic Esophagitis E-120_2

Eosinophilic Esophagitis E-121_B

Eosinophilic Esophagitis E-100_A

Eosinophilic Esophagitis E-09_5

Eosinophilic Esophagitis E-125_B

Eosinophilic Esophagitis E-142_4

Eosinophilic Esophagitis E-144_A

Eosinophilic Esophagitis E-143_B

UVA EoE images with masks

Eosinophilic Esophagitis E-124_4

Eosinophilic Esophagitis E-124_5

Eosinophilic Esophagitis E-126_A

Eosinophilic Esophagitis E-02_1

Eosinophilic Esophagitis E-14_4

Eosinophilic Esophagitis E-100_B

Eosinophilic Esophagitis E-04_3

Eosinophilic Esophagitis E-07_2

Eosinophilic Esophagitis E-123_B

Eosinophilic Esophagitis E-05

Eosinophilic Esophagitis E-128_E

Eosinophilic Esophagitis E-122_4

Eosinophilic Esophagitis E-08

Eosinophilic Esophagitis UVA_EoE_images_with_masks

Eosinophilic Esophagitis E-132_3

Eosinophilic Esophagitis E-145_3

Eosinophilic Esophagitis E-120_1

Eosinophilic Esophagitis E-02_1

Eosinophilic Esophagitis E-143_A

Eosinophilic Esophagitis E-16_5

Eosinophilic Esophagitis E-120_1

Eosinophilic Esophagitis E-120_1

Eosinophilic Esophagitis E-120_3

Eosinophilic Esophagitis E-120_2

Eosinophilic Esophagitis E-145_4

Eosinophilic Esophagitis E-145_5

Eosinophilic Esophagitis E-121_C

Eosinophilic Esophagitis E-122_2

Eosinophilic Esophagitis E-146_A

Eosinophilic Esophagitis E-122_3

Eosinophilic Esophagitis E-146_B

Eosinophilic Esophagitis E-147_1

Eosinophilic Esophagitis E-124_3

Eosinophilic Esophagitis E-147_2

Eosinophilic Esophagitis E-14_3

Eosinophilic Esophagitis E-126_B

Eosinophilic Esophagitis E-125_A

Eosinophilic Esophagitis E-15_1

Eosinophilic Esophagitis E-10_1

Eosinophilic Esophagitis E-09_3

Eosinophilic Esophagitis E-101_E

Eosinophilic Esophagitis E-127_D

Eosinophilic Esophagitis E-127_C

Eosinophilic Esophagitis E-15_2

Eosinophilic Esophagitis E-127_E

Eosinophilic Esophagitis E-128_C

Eosinophilic Esophagitis E-06

Eosinophilic Esophagitis E-09_4

Eosinophilic Esophagitis E-15_3

Eosinophilic Esophagitis E-128_D

Eosinophilic Esophagitis E-129_C

Eosinophilic Esophagitis E-04_2

Eosinophilic Esophagitis E-10_3

Eosinophilic Esophagitis E-04_2

Eosinophilic Esophagitis E-02_2

Eosinophilic Esophagitis E-129_D

Eosinophilic Esophagitis E-10_2

Eosinophilic Esophagitis E-144_B

Eosinophilic Esophagitis E-16_3

Eosinophilic Esophagitis E-09_3

Eosinophilic Esophagitis E-07_1

Eosinophilic Esophagitis E-129_E

Eosinophilic Esophagitis E-12_3

Eosinophilic Esophagitis E-10_1

Eosinophilic Esophagitis E-01

Eosinophilic Esophagitis E-07_2

Eosinophilic Esophagitis E-07_1

Eosinophilic Esophagitis E-11_3

Eosinophilic Esophagitis E-02_1

Eosinophilic Esophagitis E-103_5

Eosinophilic Esophagitis E-02_1

Eosinophilic Esophagitis E-09_3

Eosinophilic Esophagitis E-133_E

Eosinophilic Esophagitis E-103_4

Eosinophilic Esophagitis E-10_1

Eosinophilic Esophagitis E-07_2

Eosinophilic Esophagitis E-09_5

Eosinophilic Esophagitis E-130_B

Eosinophilic Esophagitis E-04_1

Eosinophilic Esophagitis E-100_A

Eosinophilic Esophagitis E-09_4

Eosinophilic Esophagitis E-04_3

Eosinophilic Esophagitis E-131

Eosinophilic Esophagitis E-100_B

Eosinophilic Esophagitis E-10_3

Eosinophilic Esophagitis E-132_4

Eosinophilic Esophagitis E-02_2

Eosinophilic Esophagitis E-10_2
