Project Details and Related Resources

EoE Project - Syed Lab

414 annotated biopsy patches from 30 adult EoE patients at the University of Virginia (UVA) were used to develop a center-specific UVA eosinophil segmentation model using deep learning. 692 annotated biopsy patches from 6 pediatric EoE patients from Cincinnati Children’s Hospital (CCH) were used to develop another center-specific model. The models were evaluated in an independent test set of 100 patches from the same center and validated on 100 patches from the other center. A combined model was trained and tested on patches from both centers. The annotated patches are present in a zip file called "UVA EoE images with masks" available for download. URL for download: https://doi.org/10.18130/V3/GB5YVH

Associated Datasets

University of Virginia
Dataset
Eosinophilic Esophagitis E-11_4
University of Virginia
Dataset
Eosinophilic Esophagitis E-120_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-04_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-120_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-121_B
University of Virginia
Dataset
Eosinophilic Esophagitis E-100_A
University of Virginia
Dataset
Eosinophilic Esophagitis E-09_5
University of Virginia
Dataset
Eosinophilic Esophagitis E-125_B
University of Virginia
Dataset
Eosinophilic Esophagitis E-142_4
University of Virginia
Dataset
Eosinophilic Esophagitis E-144_A
University of Virginia
Dataset
Eosinophilic Esophagitis E-143_B
University of Virginia
Dataset
UVA EoE images with masks
University of Virginia
Dataset
Eosinophilic Esophagitis E-124_4
University of Virginia
Dataset
Eosinophilic Esophagitis E-124_5
University of Virginia
Dataset
Eosinophilic Esophagitis E-126_A
University of Virginia
Dataset
Eosinophilic Esophagitis E-02_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-14_4
University of Virginia
Dataset
Eosinophilic Esophagitis E-100_B
University of Virginia
Dataset
Eosinophilic Esophagitis E-04_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-07_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-123_B
University of Virginia
Dataset
Eosinophilic Esophagitis E-05
University of Virginia
Dataset
Eosinophilic Esophagitis E-128_E
University of Virginia
Dataset
Eosinophilic Esophagitis E-122_4
University of Virginia
Dataset
Eosinophilic Esophagitis E-08
University of Virginia
Dataset
Eosinophilic Esophagitis UVA_EoE_images_with_masks
University of Virginia
Dataset
Eosinophilic Esophagitis E-132_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-145_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-120_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-02_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-143_A
University of Virginia
Dataset
Eosinophilic Esophagitis E-16_5
University of Virginia
Dataset
Eosinophilic Esophagitis E-120_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-120_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-120_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-120_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-145_4
University of Virginia
Dataset
Eosinophilic Esophagitis E-145_5
University of Virginia
Dataset
Eosinophilic Esophagitis E-121_C
University of Virginia
Dataset
Eosinophilic Esophagitis E-122_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-146_A
University of Virginia
Dataset
Eosinophilic Esophagitis E-122_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-146_B
University of Virginia
Dataset
Eosinophilic Esophagitis E-147_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-124_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-147_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-14_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-126_B
University of Virginia
Dataset
Eosinophilic Esophagitis E-125_A
University of Virginia
Dataset
Eosinophilic Esophagitis E-15_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-10_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-09_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-101_E
University of Virginia
Dataset
Eosinophilic Esophagitis E-127_D
University of Virginia
Dataset
Eosinophilic Esophagitis E-127_C
University of Virginia
Dataset
Eosinophilic Esophagitis E-15_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-127_E
University of Virginia
Dataset
Eosinophilic Esophagitis E-128_C
University of Virginia
Dataset
Eosinophilic Esophagitis E-06
University of Virginia
Dataset
Eosinophilic Esophagitis E-09_4
University of Virginia
Dataset
Eosinophilic Esophagitis E-15_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-128_D
University of Virginia
Dataset
Eosinophilic Esophagitis E-129_C
University of Virginia
Dataset
Eosinophilic Esophagitis E-04_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-10_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-04_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-02_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-129_D
University of Virginia
Dataset
Eosinophilic Esophagitis E-10_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-144_B
University of Virginia
Dataset
Eosinophilic Esophagitis E-16_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-09_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-07_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-129_E
University of Virginia
Dataset
Eosinophilic Esophagitis E-12_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-10_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-01
University of Virginia
Dataset
Eosinophilic Esophagitis E-07_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-07_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-11_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-02_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-103_5
University of Virginia
Dataset
Eosinophilic Esophagitis E-02_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-09_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-133_E
University of Virginia
Dataset
Eosinophilic Esophagitis E-103_4
University of Virginia
Dataset
Eosinophilic Esophagitis E-10_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-07_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-09_5
University of Virginia
Dataset
Eosinophilic Esophagitis E-130_B
University of Virginia
Dataset
Eosinophilic Esophagitis E-04_1
University of Virginia
Dataset
Eosinophilic Esophagitis E-100_A
University of Virginia
Dataset
Eosinophilic Esophagitis E-09_4
University of Virginia
Dataset
Eosinophilic Esophagitis E-04_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-131
University of Virginia
Dataset
Eosinophilic Esophagitis E-100_B
University of Virginia
Dataset
Eosinophilic Esophagitis E-10_3
University of Virginia
Dataset
Eosinophilic Esophagitis E-132_4
University of Virginia
Dataset
Eosinophilic Esophagitis E-02_2
University of Virginia
Dataset
Eosinophilic Esophagitis E-10_2